Supercritical CO2 (ScCO2) invades oilwell cement under geological CO2 sequestration conditions. With the penetration of ScCO2, cement structure prone to damage when the coupled effects of capillarity and carbonation were found. Microstructural evolution of oilwell cement samples was investigated by the CT scanning and the quantitative image-based analysis and show that ScCO2 with the high humid condition would penetrate much deeper than the dry ScCO2 because of the capillarity effects. Due to the deep saline condition in the sequestration formation, the penetration of ScCO2 was retarded by the salt deposition, comparing with the ultrapure water (UP water) conditions. For further assessment of this coupled mechanism, the permeability property and contact angle changes were proposed to analyse the interface region between ScCO2, saline/UP water and oilwell cement.