The temporal variation of the energetic electron flux distribution caused by whistler mode chorus waves through the cyclotron resonant interaction provides crucial information on how electrons are accelerated in the Earth’s inner magnetosphere. This study employing a data-driven test-particle simulation demonstrates that the rapid deformation of energetic electron distribution observed by the Arase satellite is not simply explained by a quasi-linear diffusion mechanism, but is essentially caused by nonlinear scattering: the phase trapping and the phase dislocation. In response to upper-band whistler chorus bursts, multiple nonlinear interactions finally achieve an efficient flux enhancement of electrons on a time scale of the chorus burst. A quasi-linear diffusion model tends to underestimate the flux enhancement of energetic electrons as compared with a model based on the realistic dynamic frequency spectrum of whistler waves. It is concluded that the nonlinear phase trapping plays an important role in the rapid flux enhancement of energetic electrons observed by Arase.