Comparative transcriptome analysis of antennae from male crayfish
Procambarus clarkii during the mating period and non-mating period
Abstract
The red swamp crayfish Procambarus clarkii is one of the global invasive
species and has caused huge damage to aquaculture, biodiversity and
ecology in the world. Antennal-expressed receptors are important for P.
clarkii to detect olfactory cues for mate attraction, et al.. However,
few olfactory and chemosensory-related genes were reported in P. clarkii
until now. In the present study, we used RNA sequencing to investigate
the olfactory and chemosensory-related genes of the antenna of P.
clarkii during the non-mating and mating period. A total of 59218
unigenes with an average length of 1056.41 bp, and 4889 differentially
expressed unigenes (DEGs) with 2128 up-regulated and 2761 down-regulated
unigenes were obtained. Of which, 13 up-regulated and 9 down-regulated
DEGs were identified to associated with olfaction and chemical
reception, including 4 IRs or iGluRs, 8 G-protein coupled receptor, 5
transient receptor potential channels (TRP channels), 1 sodium-calcium
exchanger, 1 olfactory receptor, 1 isomerase and 2 chemosensory proteins
(CSPs). CSPs were preliminarily classified into pheromone receptors in
male red swamp crayfish. The results of quantitative real-time reverse
transcription PCR (RT-qPCR) showed that the expression trends of 8
selected unigenes were consistent, and this result also validated the
RNA-Seq data. Our results provide more comprehensive data of olfactory
and chemical communication mechanism after crayfish entering the mating
period.