Differences in methanogenic pathways and methanogenic communities in
paddy soils under three typical cropping modes
Abstract
Microbial methane (CH4) production varies among different cropping
modes,which has important implications for how to reduce CH4 emissions
from paddy fields.However,little is known about the values of
anaerobically produced δ13CH4,methanogenic pathways,and their dominant
communities in different paddy soils.Through anaerobic incubation
experiments and the stable carbon isotope with fluoromethane inhibitor
method,CH4 production potential (MPP), the relative contribution of
acetoclastic methanogenesis(fac),
and the abundance and community composition of methanogens in paddy
soils were measured under three typical cropping modes
(Rice-Wheat,RW;Rice-Fallow,RF;Double-Rice,DR) in China. The results
showed that MPP was 30.7 μg CH4 g–1 d–1 in DR soil,57% and 66%
higher than that in RW and RF soils,respectively,possibly due to the
lower pH and higher abundance of mcrA genes. Moreover,RF soil had the
highest produced δ13CH4 value(–43.9‰) and the lowest produced δ13CO2
value(–26.3‰). Based on the carbon isotope fractionations associated
with H2/CO2-dependent methanogenesis(1.049–1.062), the values of fac
estimated in RF soil(80–98%)were much higher than that in RW(39–60%)
and DR(52–75%) soils. It might be supported by that the Methanosarcina
(acetoclastic methanogens) were dominant in RF soil while Methanosarcina
and Methanobacterium(hydrogenotrophic methanogens) dominated in RW and
DR soils. Redundancy analysis revealed that the community structure of
methanogens was significantly affected by soil pH,indicating that the
differences in methanogenic pathways under the three typical cropping
modes might be caused by the changes in community composition driven by
soil pH. The findings suggest that soil pH-induced methanogenic
abundance and community composition drive paddy MPP and methanogenic
pathways, which would provide important insights into the CH4 reduction
in paddies.