Abstract
“RNA-templated/directed DNA repair” is a new biological mechanism that
has been experimentally demonstrated in bacteria, yeast and mammalian
cells. Different RNAs or artificial DNA/RNA hybrid molecules have been
used to study their role in DNA double-strand break (DSB) repair. Recent
work also demonstrated that small non-coding RNAs (DDRNAs produced by
DICER, Drosha) and/or newly RNAPII transcribed RNA (dilncRNA) are
orchestrating the initial steps in DSB repair processes, giving another
hint for the involvement of RNA in DNA repair processes. Here we
demonstrate that pre-mRNA molecules could be used for DSB repair. Our
mamma¬lian cell culture system is based on 3 components: (1) a mutated
reporter gene producing an intron-containing pre-mRNA, (2) an
sgRNA-guided dCas13b::ADAR RNA editor specific for this pre-mRNA, and
(3) I-SceI to create a transient DSB situation. We were able demonstrate
that the ADAR-edited pre-mRNA is being used in cis for DSB repair,
thereby converting the mutated reporter gene into an active reporter
gene due to reconstituted splicing. We also used overexpression and
knock-down of several proteins to investigate their putative role in
this novel RNA-mediated DNA repair (RmDR) pathway. Based on our data,
RNA can be used as template for DNA repair processes.